How healthy is your neighborhood?

Sophie Geoghan
Posted on Aug 2, 2018

Visualizing local health data across 500 US Cities

Within an American city, the health of its citizens can vary from one block to the next. I used a dataset from the Center for Disease Control and Prevention (CDC) to visualize this difference between neighborhoods across five hundred cities in the United States. This project analyzed data from the annual core questions from the Behavioral Risk Factor Surveillance System (BRFSS) and used these in combination with census data to calculate small area estimates within neighborhoods of American cities.

The project covers five hundred American cities which involved around 100 million citizens, or about 33.4% of the population. The 27 chronic disease measures within this dataset were split into three categories: unhealthy behaviors, preventative measures, and health outcomes. For each measure, the dataset included crude prevalence with 95% confidence intervals. At the citywide level, the age-adjusted prevalence was also given, in which the prevalence that would have existed in a standard population’s distribution of old and young people was calculated.

See the full list of measures in the table below:

Health Outcomes Preventative Measures Unhealthy Behaviors
Arthritis
Stroke
Cancer (excluding skin cancer)
Chronic kidney disease
Chronic obstructive pulmonary disease
Coronary heart disease
Current asthma
Diagnosed diabetes
High blood pressure
High cholesterol among adults aged ≥18 years who have been screened in the past 5 years
Mental health not good for ≥14 days
Physical health not good for ≥14 days
Cholesterol screening
Current lack of health insurance among adults aged 18–64 years
Taking medicine for high blood pressure control among those with high blood pressure
Visits to doctor for routine checkup within the past year
Binge drinking
Current smoking
No leisure-time physical activity
Obesity

 

I decided to visualize this dataset at three scales: statewide, city-wide, and within cities.

Comparing across states

On the statewide tab a user could compare two health measures across all the states within the U.S. and see the correlation between those two measures. This would allow a user to compare, for example, unhealthy behaviors with health outcomes. In the example below, I chose “Sleeping less than 7 hours among adults aged >=18 Years” and “Mental health not good for >=14 days among adults aged >=18 Years,” which has a Pearson correlation coefficient of 0.83.

correlation tab

 

Comparing states and their cities

On the city-wide tab, a user can compare one health measure’s prevalence in all the cities within as many states as they’d like, with the overall prevalence in the U.S. In the example below, I have chosen “No leisure-time physical activity among adults aged >=18 Years” and compared two states, New York and Colorado. The horizontal black line represents the overall prevalence in the U.S.

As one might expect, most cities in New York state have a higher prevalence of “no leisure-time physical activity” than the U.S. as a whole, while cities in Colorado fall below the U.S. average. This makes sense, considering all the outdoor activities that are a common part of the culture within Colorado state.

Comparing within cities

On the last tab, I created an interactive map that made use of the most important part of this dataset: the small area estimates for regions within cities. The circle markers on this map have a radius proportional to the population of the census tract area where they are placed, and a color red, orange, yellow, or green corresponding to quartiles of the U.S. overall within that measure.

 

One can zoom in to one city, clicking on a circle to get more information like the exact prevalence, the confidence interval, and the population:

 

 

This interactive map makes use of the most innovative part of the dataset: the small area estimates that scale down to the size of census tracts. This would allow policy makers and city officials to determine where improved health services may be needed on the level of very specific neighborhoods.

Future work:

I think the ideal implementation of this visualization would have involved a correlation between two measures inside an interactive map, somehow combining the first and third tabs. This would allow users to see exactly how certain unhealthy behaviors or preventative measures might correlate with health outcomes to determine which preventative measures or health programs might be best used, and exactly where.

Link to code: https://github.com/geoghan12/ShinyFiveHundredCities

About Author

Sophie Geoghan

Sophie Geoghan

Sophie is currently a NYC Data Science Fellow. She graduated from MIT with a BS in Brain and Cognitive Sciences in 2016 and spent one year working as a research assistant in neuroscience labs through MIT's MISTI program....
View all posts by Sophie Geoghan >

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